Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 MIR5696-201ENST00000578474 85 ntBASIC4.77□□□□□ -1.65
CPNE3O75131 MIR4737-201ENST00000583979 81 ntBASIC4.77□□□□□ -1.65
CPNE3O75131 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CPNE3O75131 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.77□□□□□ -1.65
CPNE3O75131 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.77□□□□□ -1.65
CPNE3O75131 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
CPNE3O75131 AC009643.2-201ENST00000603543 1448 ntBASIC4.77□□□□□ -1.65
CPNE3O75131 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CPNE3O75131 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CPNE3O75131 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.77□□□□□ -1.65
CPNE3O75131 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
CPNE3O75131 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.77□□□□□ -1.65
CPNE3O75131 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CPNE3O75131 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.76□□□□□ -1.65
CPNE3O75131 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CPNE3O75131 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CPNE3O75131 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CPNE3O75131 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CPNE3O75131 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.76□□□□□ -1.65
CPNE3O75131 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
CPNE3O75131 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CPNE3O75131 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.76□□□□□ -1.65
CPNE3O75131 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CPNE3O75131 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.76□□□□□ -1.65
CPNE3O75131 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CPNE3O75131 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CPNE3O75131 Y_RNA.214-201ENST00000364201 112 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 Y_RNA.222-201ENST00000364264 102 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 RNU4-50P-201ENST00000364361 141 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 Y_RNA.257-201ENST00000364596 102 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.76□□□□□ -1.65
CPNE3O75131 RNU6-472P-201ENST00000384299 107 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 MIR628-201ENST00000385229 95 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 MIR1302-6-201ENST00000408466 90 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 SNORA77-201ENST00000408716 125 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 MTCO3P19-201ENST00000415864 321 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 RBMY1KP-201ENST00000423480 476 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.76□□□□□ -1.65
CPNE3O75131 BX323845.1-201ENST00000432417 179 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 AL159987.2-201ENST00000432754 307 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.76□□□□□ -1.65
CPNE3O75131 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.76□□□□□ -1.65
CPNE3O75131 HMGN2P21-201ENST00000447764 270 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CPNE3O75131 RPL23AP24-201ENST00000458203 385 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 AL591473.1-201ENST00000464297 313 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
CPNE3O75131 AC107222.1-201ENST00000510899 637 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.76□□□□□ -1.65
CPNE3O75131 SNORA25.11-201ENST00000515935 105 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 RNU6-572P-201ENST00000516724 80 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.76□□□□□ -1.65
CPNE3O75131 AC006349.1-201ENST00000555526 235 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 MIR5701-3-201ENST00000578890 82 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 MIR3667-201ENST00000581025 74 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 MIR5701-1-201ENST00000585138 82 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.76□□□□□ -1.65
CPNE3O75131 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.76□□□□□ -1.65
CPNE3O75131 RPS29P30-201ENST00000600975 111 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 RAC1P9-201ENST00000604990 392 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 MIR5701-2-201ENST00000615634 82 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 AC131238.1-201ENST00000617135 328 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 BMS1P21-201ENST00000634565 365 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CPNE3O75131 AC032011.1-201ENST00000611703 1549 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 AL136964.1-201ENST00000622038 2990 ntBASIC4.76□□□□□ -1.65
CPNE3O75131 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CPNE3O75131 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CPNE3O75131 AC233263.6-201ENST00000631132 1963 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CPNE3O75131 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CPNE3O75131 Y_RNA.447-201ENST00000384184 113 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 RNU6-166P-201ENST00000384371 107 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 SNORA69.1-201ENST00000390904 137 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 Y_RNA.625-201ENST00000411256 107 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 ELOCP20-201ENST00000422460 345 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 AC104333.2-201ENST00000422630 192 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 MTND3P9-201ENST00000429526 346 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 RPS29P9-201ENST00000440360 171 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.75□□□□□ -1.65
CPNE3O75131 ANP32BP2-201ENST00000454525 545 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 AC104164.2-201ENST00000496953 495 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 RNU6-1143P-201ENST00000516125 104 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 RNA5SP464-201ENST00000516251 108 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 SNORA40.15-201ENST00000516884 107 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
CPNE3O75131 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.75□□□□□ -1.65
CPNE3O75131 AMZ2P1-203ENST00000565833 850 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 MIR4330-201ENST00000579077 105 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 MIR4270-201ENST00000581799 70 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 AC053481.4-201ENST00000583164 216 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.75□□□□□ -1.65
CPNE3O75131 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.75□□□□□ -1.65
CPNE3O75131 AL159153.1-201ENST00000619688 317 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 AC103858.2-201ENST00000621471 543 ntBASIC4.75□□□□□ -1.65
CPNE3O75131 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CPNE3O75131 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CPNE3O75131 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CPNE3O75131 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.75□□□□□ -1.65
CPNE3O75131 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms