Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.8□□□□□ -1.8
PHGDHO43175 AC090740.1-201ENST00000623193 2262 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.79□□□□□ -1.8
PHGDHO43175 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PHGDHO43175 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PHGDHO43175 Y_RNA.86-201ENST00000363020 111 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 Y_RNA.157-201ENST00000363638 102 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 SNORA70.2-201ENST00000364506 135 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 RNU5E-4P-201ENST00000364931 120 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PHGDHO43175 RNU6-38P-201ENST00000384085 107 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 Y_RNA.534-201ENST00000384599 112 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 AL022722.2-201ENST00000402519 180 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 AL590704.1-201ENST00000402856 794 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PHGDHO43175 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.79□□□□□ -1.8
PHGDHO43175 AC138393.2-201ENST00000414742 246 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 ERLEC1P1-201ENST00000433806 578 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 SNORA71B-202ENST00000439232 272 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 Z82210.1-201ENST00000440037 231 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 SCARNA18-201ENST00000459004 134 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 RNU6-333P-201ENST00000459117 107 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 RPL7P19-201ENST00000469948 618 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.79□□□□□ -1.8
PHGDHO43175 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.79□□□□□ -1.8
PHGDHO43175 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.79□□□□□ -1.8
PHGDHO43175 AC002456.2-201ENST00000509356 380 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.79□□□□□ -1.8
PHGDHO43175 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.79□□□□□ -1.8
PHGDHO43175 AC106782.4-201ENST00000568264 210 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 MIR4424-201ENST00000585257 86 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 AL137849.1-201ENST00000604767 169 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PHGDHO43175 U7.8-201ENST00000619968 63 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 MIR6758-201ENST00000620653 63 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 AL008636.1-201ENST00000625038 1018 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.79□□□□□ -1.8
PHGDHO43175 AC100810.6-201ENST00000638068 285 ntBASIC3.79□□□□□ -1.8
PHGDHO43175 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PHGDHO43175 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PHGDHO43175 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PHGDHO43175 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PHGDHO43175 HSPA8P4-201ENST00000511877 1920 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PHGDHO43175 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.78□□□□□ -1.8
PHGDHO43175 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.78□□□□□ -1.8
PHGDHO43175 MIR514A2-201ENST00000385131 88 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 MIR514A3-201ENST00000385132 88 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PHGDHO43175 RNU6-332P-201ENST00000391193 108 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 AL592114.1-201ENST00000403842 483 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 BX323014.1-201ENST00000412876 237 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.78□□□□□ -1.8
PHGDHO43175 RPL21P109-201ENST00000422213 475 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 TMEM167AP1-201ENST00000423409 219 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.78□□□□□ -1.8
PHGDHO43175 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.78□□□□□ -1.8
PHGDHO43175 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.78□□□□□ -1.8
PHGDHO43175 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 GPM6BP2-201ENST00000432046 144 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 AL591704.1-201ENST00000432574 275 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 AL512844.2-201ENST00000433990 593 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 RPS24P13-201ENST00000442520 397 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 GPM6BP1-201ENST00000446387 144 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.78□□□□□ -1.8
PHGDHO43175 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.78□□□□□ -1.8
PHGDHO43175 AC091885.1-201ENST00000506658 268 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 MTCO3P9-201ENST00000506989 781 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.78□□□□□ -1.8
PHGDHO43175 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.78□□□□□ -1.8
PHGDHO43175 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.78□□□□□ -1.8
PHGDHO43175 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.78□□□□□ -1.8
PHGDHO43175 AC022695.1-201ENST00000522089 237 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 CASP1P1-201ENST00000526345 212 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 PSMA2P1-201ENST00000526365 646 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 CENPUP1-201ENST00000526649 1202 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 BNIP3P6-201ENST00000549284 499 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.78□□□□□ -1.8
PHGDHO43175 AC078814.3-201ENST00000553036 491 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 ZNF192P1-203ENST00000565888 810 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 AC120057.2-201ENST00000571520 271 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.78□□□□□ -1.8
PHGDHO43175 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.78□□□□□ -1.8
PHGDHO43175 RNU6-89P-201ENST00000606519 100 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 AC009570.1-201ENST00000609599 745 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 MIR6500-201ENST00000622700 86 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.78□□□□□ -1.8
PHGDHO43175 MIR492-201ENST00000638676 116 ntBASIC3.78□□□□□ -1.8
PHGDHO43175 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PHGDHO43175 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
PHGDHO43175 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PHGDHO43175 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PHGDHO43175 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.77□□□□□ -1.81
PHGDHO43175 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PHGDHO43175 ZNF285B-201ENST00000561698 1767 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PHGDHO43175 SNORA72.1-201ENST00000363485 129 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 SNORA4.3-201ENST00000365564 137 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms