Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 TPT1P14-201ENST00000448018 505 ntBASIC2.3□□□□□ -2.04
LSM1O15116 EEF1B2P7-201ENST00000451177 676 ntBASIC2.3□□□□□ -2.04
LSM1O15116 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.3□□□□□ -2.04
LSM1O15116 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.3□□□□□ -2.04
LSM1O15116 MEMO1P3-201ENST00000459811 302 ntBASIC2.3□□□□□ -2.04
LSM1O15116 RPS27P21-201ENST00000486977 252 ntBASIC2.3□□□□□ -2.04
LSM1O15116 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.3□□□□□ -2.04
LSM1O15116 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.3□□□□□ -2.04
LSM1O15116 AC105252.1-201ENST00000503089 286 ntBASIC2.3□□□□□ -2.04
LSM1O15116 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.3□□□□□ -2.04
LSM1O15116 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.3□□□□□ -2.04
LSM1O15116 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.3□□□□□ -2.04
LSM1O15116 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.3□□□□□ -2.04
LSM1O15116 HMGN1P28-201ENST00000521340 364 ntBASIC2.3□□□□□ -2.04
LSM1O15116 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.3□□□□□ -2.04
LSM1O15116 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.3□□□□□ -2.04
LSM1O15116 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.3□□□□□ -2.04
LSM1O15116 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.3□□□□□ -2.04
LSM1O15116 AC021171.1-201ENST00000603137 706 ntBASIC2.3□□□□□ -2.04
LSM1O15116 AC012640.5-201ENST00000623897 319 ntBASIC2.3□□□□□ -2.04
LSM1O15116 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.3□□□□□ -2.04
LSM1O15116 MTND4P27-201ENST00000450813 1354 ntBASIC2.3□□□□□ -2.04
LSM1O15116 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.3□□□□□ -2.04
LSM1O15116 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.3□□□□□ -2.04
LSM1O15116 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LSM1O15116 KPNA2P1-201ENST00000458289 1591 ntBASIC2.3□□□□□ -2.04
LSM1O15116 ZNF720P1-201ENST00000562403 1939 ntBASIC2.3□□□□□ -2.04
LSM1O15116 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
LSM1O15116 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LSM1O15116 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LSM1O15116 RNU5E-10P-201ENST00000363506 118 ntBASIC2.29□□□□□ -2.04
LSM1O15116 RNU6-432P-201ENST00000384196 109 ntBASIC2.29□□□□□ -2.04
LSM1O15116 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LSM1O15116 Z92545.1-201ENST00000411782 234 ntBASIC2.29□□□□□ -2.04
LSM1O15116 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LSM1O15116 MED14P1-201ENST00000430517 648 ntBASIC2.29□□□□□ -2.04
LSM1O15116 UBE2FP3-201ENST00000436366 524 ntBASIC2.29□□□□□ -2.04
LSM1O15116 MTATP6P30-201ENST00000443540 664 ntBASIC2.29□□□□□ -2.04
LSM1O15116 AL358794.1-201ENST00000445689 381 ntBASIC2.29□□□□□ -2.04
LSM1O15116 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LSM1O15116 MTCO1P27-201ENST00000448269 226 ntBASIC2.29□□□□□ -2.04
LSM1O15116 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.29□□□□□ -2.04
LSM1O15116 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LSM1O15116 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.29□□□□□ -2.04
LSM1O15116 TRBV1-201ENST00000476502 284 ntBASIC2.29□□□□□ -2.04
LSM1O15116 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.29□□□□□ -2.04
LSM1O15116 RPS15AP36-201ENST00000492022 382 ntBASIC2.29□□□□□ -2.04
LSM1O15116 AC022493.1-201ENST00000492984 337 ntBASIC2.29□□□□□ -2.04
LSM1O15116 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.29□□□□□ -2.04
LSM1O15116 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.29□□□□□ -2.04
LSM1O15116 AC110760.3-202ENST00000515177 371 ntBASIC2.29□□□□□ -2.04
LSM1O15116 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.29□□□□□ -2.04
LSM1O15116 RNU6-276P-201ENST00000516114 96 ntBASIC2.29□□□□□ -2.04
LSM1O15116 MIR514B-201ENST00000516774 80 ntBASIC2.29□□□□□ -2.04
LSM1O15116 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.29□□□□□ -2.04
LSM1O15116 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.29□□□□□ -2.04
LSM1O15116 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.29□□□□□ -2.04
LSM1O15116 AC025755.1-201ENST00000521306 278 ntBASIC2.29□□□□□ -2.04
LSM1O15116 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.29□□□□□ -2.04
LSM1O15116 AC078814.3-201ENST00000553036 491 ntBASIC2.29□□□□□ -2.04
LSM1O15116 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.29□□□□□ -2.04
LSM1O15116 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.29□□□□□ -2.04
LSM1O15116 MIR4319-201ENST00000577285 85 ntBASIC2.29□□□□□ -2.04
LSM1O15116 MIR4448-201ENST00000584360 86 ntBASIC2.29□□□□□ -2.04
LSM1O15116 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.29□□□□□ -2.04
LSM1O15116 SNORD14A-201ENST00000606526 91 ntBASIC2.29□□□□□ -2.04
LSM1O15116 AL121652.1-201ENST00000608851 448 ntBASIC2.29□□□□□ -2.04
LSM1O15116 AC107075.1-201ENST00000613695 314 ntBASIC2.29□□□□□ -2.04
LSM1O15116 AC098657.3-201ENST00000620434 263 ntBASIC2.29□□□□□ -2.04
LSM1O15116 MIR1291-201ENST00000627649 87 ntBASIC2.29□□□□□ -2.04
LSM1O15116 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
LSM1O15116 RNU6-289P-201ENST00000364093 107 ntBASIC2.28□□□□□ -2.04
LSM1O15116 RNU1-73P-201ENST00000383971 164 ntBASIC2.28□□□□□ -2.04
LSM1O15116 RNU6-1083P-201ENST00000384022 107 ntBASIC2.28□□□□□ -2.04
LSM1O15116 RNU6-413P-201ENST00000384115 107 ntBASIC2.28□□□□□ -2.04
LSM1O15116 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.28□□□□□ -2.04
LSM1O15116 HMGB3P2-201ENST00000411913 584 ntBASIC2.28□□□□□ -2.04
LSM1O15116 UBE2FP1-201ENST00000416536 447 ntBASIC2.28□□□□□ -2.04
LSM1O15116 AL109913.1-201ENST00000421173 514 ntBASIC2.28□□□□□ -2.04
LSM1O15116 AC007560.1-201ENST00000426912 237 ntBASIC2.28□□□□□ -2.04
LSM1O15116 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.28□□□□□ -2.04
LSM1O15116 AC010153.1-201ENST00000432862 727 ntBASIC2.28□□□□□ -2.04
LSM1O15116 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.28□□□□□ -2.04
LSM1O15116 SNRPEP7-201ENST00000438350 220 ntBASIC2.28□□□□□ -2.04
LSM1O15116 AC007327.1-201ENST00000447461 264 ntBASIC2.28□□□□□ -2.04
LSM1O15116 ANKRD26P4-201ENST00000455755 950 ntBASIC2.28□□□□□ -2.04
LSM1O15116 RPS3P1-201ENST00000456781 192 ntBASIC2.28□□□□□ -2.04
LSM1O15116 AC104982.1-201ENST00000478775 574 ntBASIC2.28□□□□□ -2.04
LSM1O15116 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.28□□□□□ -2.04
LSM1O15116 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.28□□□□□ -2.04
LSM1O15116 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.28□□□□□ -2.04
LSM1O15116 AC091163.3-201ENST00000518269 1144 ntBASIC2.28□□□□□ -2.04
LSM1O15116 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.28□□□□□ -2.04
LSM1O15116 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.28□□□□□ -2.04
LSM1O15116 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
LSM1O15116 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.28□□□□□ -2.04
LSM1O15116 AF038458.1-201ENST00000588406 262 ntBASIC2.28□□□□□ -2.04
LSM1O15116 AC002984.1-201ENST00000591692 448 ntBASIC2.28□□□□□ -2.04
LSM1O15116 AC021749.1-201ENST00000604322 607 ntBASIC2.28□□□□□ -2.04
LSM1O15116 APOOP1-201ENST00000604695 592 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms