Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SNORA62.1-201ENST00000364287 154 ntBASIC1.66□□□□□ -2.14
CHD1O14646 RPL7P30-201ENST00000420888 709 ntBASIC1.66□□□□□ -2.14
CHD1O14646 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.66□□□□□ -2.14
CHD1O14646 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.66□□□□□ -2.14
CHD1O14646 MTCYBP35-201ENST00000503630 1137 ntBASIC1.66□□□□□ -2.14
CHD1O14646 DEFB108E-201ENST00000524692 240 ntBASIC1.66□□□□□ -2.14
CHD1O14646 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.66□□□□□ -2.14
CHD1O14646 AP001486.3-201ENST00000615334 372 ntBASIC1.66□□□□□ -2.14
CHD1O14646 AC006963.1-201ENST00000624003 1052 ntBASIC1.66□□□□□ -2.14
CHD1O14646 AC009902.3-201ENST00000606235 2172 ntBASIC1.65□□□□□ -2.15
CHD1O14646 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.65□□□□□ -2.15
CHD1O14646 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC1.65□□□□□ -2.15
CHD1O14646 Z77249.1-201ENST00000444622 1175 ntBASIC1.65□□□□□ -2.15
CHD1O14646 RNU7-26P-201ENST00000458980 63 ntBASIC1.65□□□□□ -2.15
CHD1O14646 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.65□□□□□ -2.15
CHD1O14646 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC1.65□□□□□ -2.15
CHD1O14646 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.65□□□□□ -2.15
CHD1O14646 CBX3P8-201ENST00000532412 525 ntBASIC1.65□□□□□ -2.15
CHD1O14646 CBX3P7-201ENST00000532876 502 ntBASIC1.65□□□□□ -2.15
CHD1O14646 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.65□□□□□ -2.15
CHD1O14646 AL161629.2-201ENST00000615347 275 ntBASIC1.65□□□□□ -2.15
CHD1O14646 MIR6864-201ENST00000617935 70 ntBASIC1.65□□□□□ -2.15
CHD1O14646 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.65□□□□□ -2.15
CHD1O14646 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.64□□□□□ -2.15
CHD1O14646 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CHD1O14646 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CHD1O14646 RNU6-666P-201ENST00000363499 107 ntBASIC1.64□□□□□ -2.15
CHD1O14646 RNU11-5P-201ENST00000391216 129 ntBASIC1.64□□□□□ -2.15
CHD1O14646 AP002784.2-201ENST00000397300 549 ntBASIC1.64□□□□□ -2.15
CHD1O14646 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.64□□□□□ -2.15
CHD1O14646 AL353718.1-201ENST00000451028 517 ntBASIC1.64□□□□□ -2.15
CHD1O14646 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.64□□□□□ -2.15
CHD1O14646 AC090616.3-201ENST00000582184 217 ntBASIC1.64□□□□□ -2.15
CHD1O14646 SNORD114-21-201ENST00000606412 72 ntBASIC1.64□□□□□ -2.15
CHD1O14646 AC091925.1-201ENST00000623204 462 ntBASIC1.64□□□□□ -2.15
CHD1O14646 AC091932.3-201ENST00000624223 323 ntBASIC1.64□□□□□ -2.15
CHD1O14646 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.64□□□□□ -2.15
CHD1O14646 AC008850.1-201ENST00000427546 362 ntBASIC1.63□□□□□ -2.15
CHD1O14646 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.63□□□□□ -2.15
CHD1O14646 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.63□□□□□ -2.15
CHD1O14646 SNORA31.8-201ENST00000516327 108 ntBASIC1.63□□□□□ -2.15
CHD1O14646 AC090970.3-201ENST00000612566 866 ntBASIC1.63□□□□□ -2.15
CHD1O14646 AC009812.4-201ENST00000569134 1805 ntBASIC1.63□□□□□ -2.15
CHD1O14646 UBE2V1P9-201ENST00000414760 368 ntBASIC1.63□□□□□ -2.15
CHD1O14646 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CHD1O14646 PMCHL2-203ENST00000457791 237 ntBASIC1.63□□□□□ -2.15
CHD1O14646 AP004371.1-201ENST00000525240 214 ntBASIC1.63□□□□□ -2.15
CHD1O14646 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.63□□□□□ -2.15
CHD1O14646 CISD1P1-201ENST00000393907 327 ntBASIC1.62□□□□□ -2.15
CHD1O14646 MIR936-201ENST00000401264 98 ntBASIC1.62□□□□□ -2.15
CHD1O14646 FCF1P2-201ENST00000415284 583 ntBASIC1.62□□□□□ -2.15
CHD1O14646 CBX3P6-201ENST00000430257 527 ntBASIC1.62□□□□□ -2.15
CHD1O14646 MTCYBP34-201ENST00000439552 670 ntBASIC1.62□□□□□ -2.15
CHD1O14646 AC022447.3-201ENST00000506865 495 ntBASIC1.62□□□□□ -2.15
CHD1O14646 AC004908.2-201ENST00000609090 574 ntBASIC1.62□□□□□ -2.15
CHD1O14646 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.61□□□□□ -2.15
CHD1O14646 RNU6-492P-201ENST00000363035 104 ntBASIC1.61□□□□□ -2.15
CHD1O14646 SNORA1.3-201ENST00000384676 136 ntBASIC1.61□□□□□ -2.15
CHD1O14646 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.61□□□□□ -2.15
CHD1O14646 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.61□□□□□ -2.15
CHD1O14646 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.61□□□□□ -2.15
CHD1O14646 MIR4698-201ENST00000577795 80 ntBASIC1.61□□□□□ -2.15
CHD1O14646 COX6CP3-201ENST00000580869 223 ntBASIC1.61□□□□□ -2.15
CHD1O14646 AL512605.2-201ENST00000592972 256 ntBASIC1.61□□□□□ -2.15
CHD1O14646 AC008749.1-201ENST00000597650 306 ntBASIC1.61□□□□□ -2.15
CHD1O14646 MIR7974-201ENST00000615835 79 ntBASIC1.61□□□□□ -2.15
CHD1O14646 TEX21P-201ENST00000447107 1476 ntBASIC1.61□□□□□ -2.15
CHD1O14646 XKRYP1-201ENST00000423438 492 ntBASIC1.6□□□□□ -2.15
CHD1O14646 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.6□□□□□ -2.15
CHD1O14646 XKRYP2-201ENST00000432915 492 ntBASIC1.6□□□□□ -2.15
CHD1O14646 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.6□□□□□ -2.15
CHD1O14646 PABPC1P3-201ENST00000469174 459 ntBASIC1.6□□□□□ -2.15
CHD1O14646 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CHD1O14646 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CHD1O14646 NIFKP8-201ENST00000560500 874 ntBASIC1.6□□□□□ -2.15
CHD1O14646 AL161423.1-201ENST00000613700 262 ntBASIC1.6□□□□□ -2.15
CHD1O14646 HMGB1P24-202ENST00000615653 685 ntBASIC1.6□□□□□ -2.15
CHD1O14646 AC092140.2-201ENST00000618027 521 ntBASIC1.6□□□□□ -2.15
CHD1O14646 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.6□□□□□ -2.15
CHD1O14646 MTND5P9-201ENST00000503854 1755 ntBASIC1.6□□□□□ -2.15
CHD1O14646 AL390862.1-201ENST00000635467 1469 ntBASIC1.6□□□□□ -2.15
CHD1O14646 SNORA3A-201ENST00000364113 130 ntBASIC1.6□□□□□ -2.15
CHD1O14646 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CHD1O14646 RPS20P15-201ENST00000412792 311 ntBASIC1.6□□□□□ -2.15
CHD1O14646 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CHD1O14646 AC097493.1-201ENST00000463958 372 ntBASIC1.6□□□□□ -2.15
CHD1O14646 RPL31P41-201ENST00000477967 372 ntBASIC1.6□□□□□ -2.15
CHD1O14646 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.6□□□□□ -2.15
CHD1O14646 AC023824.2-201ENST00000566185 400 ntBASIC1.6□□□□□ -2.15
CHD1O14646 AGGF1P5-201ENST00000567900 919 ntBASIC1.6□□□□□ -2.15
CHD1O14646 MIR3117-201ENST00000584034 78 ntBASIC1.6□□□□□ -2.15
CHD1O14646 AL009028.1-201ENST00000604895 802 ntBASIC1.6□□□□□ -2.15
CHD1O14646 AL627230.6-201ENST00000611129 280 ntBASIC1.6□□□□□ -2.15
CHD1O14646 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.59□□□□□ -2.15
CHD1O14646 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.59□□□□□ -2.15
CHD1O14646 RNA5SP391-201ENST00000363456 119 ntBASIC1.59□□□□□ -2.16
CHD1O14646 RNA5SP354-201ENST00000391247 136 ntBASIC1.59□□□□□ -2.16
CHD1O14646 RNU6-193P-201ENST00000410977 107 ntBASIC1.59□□□□□ -2.16
CHD1O14646 ARL2BPP3-201ENST00000421226 480 ntBASIC1.59□□□□□ -2.16
CHD1O14646 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms