Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC137800.2-201ENST00000574375 120 ntBASIC3.1□□□□□ -1.91
O00370 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.1□□□□□ -1.91
O00370 AC105224.1-201ENST00000587055 421 ntBASIC3.1□□□□□ -1.91
O00370 NBR2-204ENST00000587322 63 ntBASIC3.1□□□□□ -1.91
O00370 AC040904.1-201ENST00000590850 223 ntBASIC3.1□□□□□ -1.91
O00370 AL359999.1-201ENST00000604513 294 ntBASIC3.1□□□□□ -1.91
O00370 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.1□□□□□ -1.91
O00370 AC245008.1-201ENST00000608123 476 ntBASIC3.1□□□□□ -1.91
O00370 AC107871.2-201ENST00000612894 502 ntBASIC3.1□□□□□ -1.91
O00370 AC025594.3-201ENST00000613068 790 ntBASIC3.1□□□□□ -1.91
O00370 AL161629.2-201ENST00000615347 275 ntBASIC3.1□□□□□ -1.91
O00370 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.1□□□□□ -1.91
O00370 AC110994.2-201ENST00000635481 492 ntBASIC3.1□□□□□ -1.91
O00370 AC090582.1-201ENST00000636321 199 ntBASIC3.1□□□□□ -1.91
O00370 TPTE2P4-201ENST00000258589 1605 ntBASIC3.1□□□□□ -1.91
O00370 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
O00370 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.1□□□□□ -1.91
O00370 OR4G2P-202ENST00000641004 1759 ntBASIC3.1□□□□□ -1.91
O00370 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
O00370 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
O00370 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.09□□□□□ -1.91
O00370 AC092447.7-201ENST00000422212 1621 ntBASIC3.09□□□□□ -1.91
O00370 RNU1-140P-201ENST00000365040 165 ntBASIC3.09□□□□□ -1.91
O00370 SNORA9.2-201ENST00000365361 133 ntBASIC3.09□□□□□ -1.91
O00370 U8.9-201ENST00000365667 134 ntBASIC3.09□□□□□ -1.91
O00370 SNORA44-201ENST00000384584 132 ntBASIC3.09□□□□□ -1.91
O00370 RNU6-278P-201ENST00000390945 109 ntBASIC3.09□□□□□ -1.91
O00370 MRPL42P2-201ENST00000403169 426 ntBASIC3.09□□□□□ -1.91
O00370 AL590004.2-201ENST00000404787 371 ntBASIC3.09□□□□□ -1.91
O00370 MIR1290-201ENST00000408735 78 ntBASIC3.09□□□□□ -1.91
O00370 MIR1289-1-201ENST00000408836 144 ntBASIC3.09□□□□□ -1.91
O00370 AC096664.2-201ENST00000411843 406 ntBASIC3.09□□□□□ -1.91
O00370 AL451074.5-201ENST00000415894 435 ntBASIC3.09□□□□□ -1.91
O00370 PPP1R11P2-201ENST00000423543 382 ntBASIC3.09□□□□□ -1.91
O00370 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.09□□□□□ -1.91
O00370 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.09□□□□□ -1.91
O00370 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.09□□□□□ -1.91
O00370 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.09□□□□□ -1.91
O00370 ELOCP30-201ENST00000447108 299 ntBASIC3.09□□□□□ -1.91
O00370 MTND1P27-201ENST00000451117 902 ntBASIC3.09□□□□□ -1.91
O00370 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.09□□□□□ -1.91
O00370 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.09□□□□□ -1.91
O00370 RNU7-59P-201ENST00000459101 61 ntBASIC3.09□□□□□ -1.91
O00370 NDUFB4P2-201ENST00000509515 391 ntBASIC3.09□□□□□ -1.91
O00370 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.09□□□□□ -1.91
O00370 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.09□□□□□ -1.91
O00370 AC007115.1-201ENST00000546853 234 ntBASIC3.09□□□□□ -1.91
O00370 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.09□□□□□ -1.91
O00370 HMGN1P30-201ENST00000589286 268 ntBASIC3.09□□□□□ -1.91
O00370 AC080013.6-201ENST00000606185 215 ntBASIC3.09□□□□□ -1.91
O00370 AC006338.1-201ENST00000618453 749 ntBASIC3.09□□□□□ -1.91
O00370 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.09□□□□□ -1.91
O00370 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
O00370 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.09□□□□□ -1.91
O00370 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
O00370 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.08□□□□□ -1.92
O00370 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
O00370 AC096644.4-201ENST00000563417 2912 ntBASIC3.08□□□□□ -1.92
O00370 Y_RNA.51-201ENST00000362725 102 ntBASIC3.08□□□□□ -1.92
O00370 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.08□□□□□ -1.92
O00370 RPL21P24-201ENST00000413752 448 ntBASIC3.08□□□□□ -1.92
O00370 ELOCP17-201ENST00000414751 326 ntBASIC3.08□□□□□ -1.92
O00370 MTCO2P34-201ENST00000421994 607 ntBASIC3.08□□□□□ -1.92
O00370 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.08□□□□□ -1.92
O00370 AC019097.1-201ENST00000424783 735 ntBASIC3.08□□□□□ -1.92
O00370 AL353777.1-201ENST00000425552 326 ntBASIC3.08□□□□□ -1.92
O00370 AL139132.1-201ENST00000431587 344 ntBASIC3.08□□□□□ -1.92
O00370 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.08□□□□□ -1.92
O00370 AC119618.1-201ENST00000434191 222 ntBASIC3.08□□□□□ -1.92
O00370 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.08□□□□□ -1.92
O00370 USP9YP15-201ENST00000442391 422 ntBASIC3.08□□□□□ -1.92
O00370 AL022238.1-201ENST00000442557 355 ntBASIC3.08□□□□□ -1.92
O00370 RPL39P40-201ENST00000445481 146 ntBASIC3.08□□□□□ -1.92
O00370 AC008481.1-201ENST00000463278 396 ntBASIC3.08□□□□□ -1.92
O00370 MTND1P3-201ENST00000484956 952 ntBASIC3.08□□□□□ -1.92
O00370 AC011825.1-201ENST00000484967 388 ntBASIC3.08□□□□□ -1.92
O00370 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
O00370 RNU6-56P-201ENST00000516986 93 ntBASIC3.08□□□□□ -1.92
O00370 AC022878.1-201ENST00000530684 149 ntBASIC3.08□□□□□ -1.92
O00370 AP000889.1-201ENST00000530968 660 ntBASIC3.08□□□□□ -1.92
O00370 AP000873.5-201ENST00000533906 236 ntBASIC3.08□□□□□ -1.92
O00370 AC022080.3-201ENST00000544433 482 ntBASIC3.08□□□□□ -1.92
O00370 RPL21P5-201ENST00000554662 472 ntBASIC3.08□□□□□ -1.92
O00370 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.08□□□□□ -1.92
O00370 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.08□□□□□ -1.92
O00370 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.08□□□□□ -1.92
O00370 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.08□□□□□ -1.92
O00370 AC005951.2-201ENST00000576282 495 ntBASIC3.08□□□□□ -1.92
O00370 AC009977.1-201ENST00000586015 570 ntBASIC3.08□□□□□ -1.92
O00370 AC023043.3-201ENST00000593113 385 ntBASIC3.08□□□□□ -1.92
O00370 DUXAP4-201ENST00000603046 613 ntBASIC3.08□□□□□ -1.92
O00370 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.08□□□□□ -1.92
O00370 BX664608.1-201ENST00000610519 487 ntBASIC3.08□□□□□ -1.92
O00370 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
O00370 AC010678.1-201ENST00000614118 713 ntBASIC3.08□□□□□ -1.92
O00370 TUG1_2.1-201ENST00000614234 87 ntBASIC3.08□□□□□ -1.92
O00370 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
O00370 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
O00370 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.08□□□□□ -1.92
O00370 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms