Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC019226.1-201ENST00000625666 515 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 CU459211.1-201ENST00000635667 749 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
UPK1AO00322 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.09
UPK1AO00322 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
UPK1AO00322 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
UPK1AO00322 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
UPK1AO00322 TXNP7-201ENST00000406296 293 ntBASIC1.96□□□□□ -2.1
UPK1AO00322 AL513475.1-201ENST00000406602 315 ntBASIC1.96□□□□□ -2.1
UPK1AO00322 RNU2-33P-201ENST00000410344 192 ntBASIC1.96□□□□□ -2.1
UPK1AO00322 Z98742.3-201ENST00000418637 326 ntBASIC1.96□□□□□ -2.1
UPK1AO00322 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.96□□□□□ -2.1
UPK1AO00322 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.96□□□□□ -2.1
UPK1AO00322 RPS15AP5-201ENST00000436276 388 ntBASIC1.96□□□□□ -2.1
UPK1AO00322 USP9YP8-201ENST00000441913 500 ntBASIC1.96□□□□□ -2.1
UPK1AO00322 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.96□□□□□ -2.1
UPK1AO00322 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.96□□□□□ -2.1
UPK1AO00322 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.96□□□□□ -2.1
UPK1AO00322 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.96□□□□□ -2.1
UPK1AO00322 EIF4EP3-201ENST00000498782 656 ntBASIC1.96□□□□□ -2.1
UPK1AO00322 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.96□□□□□ -2.1
UPK1AO00322 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.96□□□□□ -2.1
UPK1AO00322 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.96□□□□□ -2.1
UPK1AO00322 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.96□□□□□ -2.1
UPK1AO00322 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.96□□□□□ -2.1
UPK1AO00322 MTND3P13-201ENST00000574391 343 ntBASIC1.96□□□□□ -2.1
UPK1AO00322 MIR3935-201ENST00000583472 104 ntBASIC1.96□□□□□ -2.1
UPK1AO00322 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.96□□□□□ -2.1
UPK1AO00322 AL158163.2-201ENST00000619110 700 ntBASIC1.96□□□□□ -2.1
UPK1AO00322 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.96□□□□□ -2.1
UPK1AO00322 MIR203B-201ENST00000636080 86 ntBASIC1.96□□□□□ -2.1
UPK1AO00322 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.96□□□□□ -2.1
UPK1AO00322 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
UPK1AO00322 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.95□□□□□ -2.1
UPK1AO00322 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
UPK1AO00322 AL596028.1-201ENST00000326971 197 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 RNU4-52P-201ENST00000384209 138 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 SNORA3.2-201ENST00000408221 125 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
UPK1AO00322 AL513331.1-201ENST00000411908 397 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 AL135786.1-201ENST00000415892 214 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.95□□□□□ -2.1
UPK1AO00322 HMGB1P49-201ENST00000418882 569 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 MTCO3P30-201ENST00000426425 670 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.95□□□□□ -2.1
UPK1AO00322 UBE2V1P13-201ENST00000436983 439 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 MTND5P14-201ENST00000441481 1267 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 RPL23AP76-201ENST00000441860 458 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 AL139109.1-201ENST00000455491 297 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 AC104090.1-201ENST00000506341 1171 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 AC022447.3-201ENST00000506865 495 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.95□□□□□ -2.1
UPK1AO00322 AC008549.1-201ENST00000512900 643 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 NRON-201ENST00000517270 370 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 DEFB131D-201ENST00000526803 184 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.95□□□□□ -2.1
UPK1AO00322 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.95□□□□□ -2.1
UPK1AO00322 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.95□□□□□ -2.1
UPK1AO00322 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.95□□□□□ -2.1
UPK1AO00322 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.95□□□□□ -2.1
UPK1AO00322 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.95□□□□□ -2.1
UPK1AO00322 MIR3616-201ENST00000584070 92 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 AL353997.4-201ENST00000586196 166 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 AL139344.1-201ENST00000605228 195 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 FTX_3.1-201ENST00000610451 147 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 AC010133.1-201ENST00000615809 842 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 AC010378.1-201ENST00000619270 362 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 MTND1P37-201ENST00000636562 264 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 AC010149.2-201ENST00000637608 315 ntBASIC1.95□□□□□ -2.1
UPK1AO00322 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
UPK1AO00322 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
UPK1AO00322 RNU6-884P-201ENST00000363889 107 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 RN7SKP226-201ENST00000364912 300 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 RNU6-432P-201ENST00000384196 109 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
UPK1AO00322 SNORA40.4-201ENST00000390971 128 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 AL023284.1-201ENST00000403956 276 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 RNU2-49P-201ENST00000410666 184 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 MTND1P21-201ENST00000412991 285 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.94□□□□□ -2.1
UPK1AO00322 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.94□□□□□ -2.1
UPK1AO00322 AL449283.1-202ENST00000418249 604 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.94□□□□□ -2.1
UPK1AO00322 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.94□□□□□ -2.1
UPK1AO00322 SRIP2-201ENST00000428470 166 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 RPL35AP22-201ENST00000436855 335 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 SNRPEP7-201ENST00000438350 220 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.94□□□□□ -2.1
UPK1AO00322 MTND1P31-201ENST00000449206 961 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 RPL12P25-201ENST00000455592 494 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 AC104629.1-201ENST00000494226 508 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.94□□□□□ -2.1
UPK1AO00322 AC024589.1-201ENST00000512207 263 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 AC008837.2-201ENST00000513076 418 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 AC021451.1-201ENST00000523498 1129 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 AP003497.1-201ENST00000528472 562 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.94□□□□□ -2.1
UPK1AO00322 MIR1273D-201ENST00000577266 86 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms