Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AP001269.3-201ENST00000588718 329 ntBASIC0.57□□□□□ -2.32
LINC01549A6NIU2 MIR7973-1-201ENST00000614683 76 ntBASIC0.57□□□□□ -2.32
LINC01549A6NIU2 AL512506.2-201ENST00000624472 458 ntBASIC0.57□□□□□ -2.32
LINC01549A6NIU2 AC097372.4-201ENST00000625025 466 ntBASIC0.57□□□□□ -2.32
LINC01549A6NIU2 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.57□□□□□ -2.32
LINC01549A6NIU2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC0.57□□□□□ -2.32
LINC01549A6NIU2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.56□□□□□ -2.32
LINC01549A6NIU2 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.56□□□□□ -2.32
LINC01549A6NIU2 Y_RNA.67-201ENST00000362870 100 ntBASIC0.56□□□□□ -2.32
LINC01549A6NIU2 MIR634-201ENST00000385208 97 ntBASIC0.56□□□□□ -2.32
LINC01549A6NIU2 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01549A6NIU2 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01549A6NIU2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01549A6NIU2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01549A6NIU2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.56□□□□□ -2.32
LINC01549A6NIU2 USP9YP35-201ENST00000435696 412 ntBASIC0.56□□□□□ -2.32
LINC01549A6NIU2 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01549A6NIU2 RPL9P9-202ENST00000466501 579 ntBASIC0.56□□□□□ -2.32
LINC01549A6NIU2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.56□□□□□ -2.32
LINC01549A6NIU2 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01549A6NIU2 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.56□□□□□ -2.32
LINC01549A6NIU2 RPS3AP4-201ENST00000555161 764 ntBASIC0.56□□□□□ -2.32
LINC01549A6NIU2 AC004817.2-201ENST00000561794 651 ntBASIC0.56□□□□□ -2.32
LINC01549A6NIU2 MIR4422-201ENST00000581938 83 ntBASIC0.56□□□□□ -2.32
LINC01549A6NIU2 FAM71BP1-201ENST00000604431 523 ntBASIC0.56□□□□□ -2.32
LINC01549A6NIU2 AC068276.1-201ENST00000605793 379 ntBASIC0.56□□□□□ -2.32
LINC01549A6NIU2 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.56□□□□□ -2.32
LINC01549A6NIU2 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.56□□□□□ -2.32
LINC01549A6NIU2 AL513185.3-201ENST00000433335 1300 ntBASIC0.56□□□□□ -2.32
LINC01549A6NIU2 AL391516.1-201ENST00000554380 2449 ntBASIC0.56□□□□□ -2.32
LINC01549A6NIU2 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01549A6NIU2 AL049737.1-201ENST00000413920 1403 ntBASIC0.55□□□□□ -2.32
LINC01549A6NIU2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
LINC01549A6NIU2 AC016716.1-201ENST00000265882 708 ntBASIC0.55□□□□□ -2.32
LINC01549A6NIU2 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.55□□□□□ -2.32
LINC01549A6NIU2 RNU4-51P-201ENST00000364206 140 ntBASIC0.55□□□□□ -2.32
LINC01549A6NIU2 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
LINC01549A6NIU2 RNU11-5P-201ENST00000391216 129 ntBASIC0.55□□□□□ -2.32
LINC01549A6NIU2 RPS15AP38-201ENST00000413110 372 ntBASIC0.55□□□□□ -2.32
LINC01549A6NIU2 MTCO3P4-201ENST00000419236 787 ntBASIC0.55□□□□□ -2.32
LINC01549A6NIU2 CR848007.2-201ENST00000424918 787 ntBASIC0.55□□□□□ -2.32
LINC01549A6NIU2 MTND5P15-201ENST00000434246 349 ntBASIC0.55□□□□□ -2.32
LINC01549A6NIU2 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC01549A6NIU2 RPL31P60-201ENST00000478450 367 ntBASIC0.55□□□□□ -2.32
LINC01549A6NIU2 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC01549A6NIU2 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.55□□□□□ -2.32
LINC01549A6NIU2 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.55□□□□□ -2.32
LINC01549A6NIU2 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.55□□□□□ -2.32
LINC01549A6NIU2 AL009028.1-201ENST00000604895 802 ntBASIC0.55□□□□□ -2.32
LINC01549A6NIU2 BNIP3P4-201ENST00000604946 565 ntBASIC0.55□□□□□ -2.32
LINC01549A6NIU2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC01549A6NIU2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.55□□□□□ -2.32
LINC01549A6NIU2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.55□□□□□ -2.32
LINC01549A6NIU2 VPS8-228ENST00000628962 207 ntTSL 5 BASIC0.55□□□□□ -2.32
LINC01549A6NIU2 AC008568.2-201ENST00000623862 2313 ntBASIC0.55□□□□□ -2.32
LINC01549A6NIU2 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AC008163.1-202ENST00000636004 2889 ntBASIC0.54□□□□□ -2.32
LINC01549A6NIU2 RNU6-263P-201ENST00000363811 107 ntBASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.54□□□□□ -2.32
LINC01549A6NIU2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
LINC01549A6NIU2 U8.10-201ENST00000384260 133 ntBASIC0.54□□□□□ -2.32
LINC01549A6NIU2 RNA5SP465-201ENST00000391195 109 ntBASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AC008850.1-201ENST00000427546 362 ntBASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AL034418.1-201ENST00000448675 860 ntBASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.54□□□□□ -2.32
LINC01549A6NIU2 MTND4LP3-201ENST00000468320 276 ntBASIC0.54□□□□□ -2.32
LINC01549A6NIU2 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC0.54□□□□□ -2.32
LINC01549A6NIU2 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.54□□□□□ -2.32
LINC01549A6NIU2 UBL5P1-201ENST00000507979 193 ntBASIC0.54□□□□□ -2.32
LINC01549A6NIU2 CBX3P3-201ENST00000508108 532 ntBASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.54□□□□□ -2.32
LINC01549A6NIU2 RNU5F-8P-201ENST00000515941 111 ntBASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AC005668.1-201ENST00000571142 476 ntBASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AP005136.1-201ENST00000579765 429 ntBASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AL355472.4-201ENST00000610233 626 ntBASIC0.54□□□□□ -2.32
LINC01549A6NIU2 MIR6798-201ENST00000612887 67 ntBASIC0.54□□□□□ -2.32
LINC01549A6NIU2 AC012676.2-201ENST00000619258 186 ntBASIC0.54□□□□□ -2.32
LINC01549A6NIU2 HSBP1P2-201ENST00000299671 229 ntBASIC0.53□□□□□ -2.32
LINC01549A6NIU2 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
LINC01549A6NIU2 RNU4-23P-201ENST00000362839 140 ntBASIC0.53□□□□□ -2.32
LINC01549A6NIU2 MIR100-201ENST00000385259 80 ntBASIC0.53□□□□□ -2.32
LINC01549A6NIU2 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
LINC01549A6NIU2 AL356421.1-201ENST00000403255 413 ntBASIC0.53□□□□□ -2.32
LINC01549A6NIU2 SPA17P1-201ENST00000416656 452 ntBASIC0.53□□□□□ -2.32
LINC01549A6NIU2 UBE2V2P3-201ENST00000433562 437 ntBASIC0.53□□□□□ -2.32
LINC01549A6NIU2 AL590365.1-201ENST00000450788 243 ntBASIC0.53□□□□□ -2.32
LINC01549A6NIU2 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.53□□□□□ -2.32
LINC01549A6NIU2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC0.53□□□□□ -2.32
LINC01549A6NIU2 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.53□□□□□ -2.32
LINC01549A6NIU2 RNU1-41P-201ENST00000516161 162 ntBASIC0.53□□□□□ -2.32
LINC01549A6NIU2 RNU1-48P-201ENST00000516400 162 ntBASIC0.53□□□□□ -2.32
LINC01549A6NIU2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms