Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 AP002782.1-201ENST00000623107 614 ntBASIC2.84□□□□□ -1.95
SYCE3A1L190 U2.21-201ENST00000637295 81 ntBASIC2.84□□□□□ -1.95
SYCE3A1L190 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SYCE3A1L190 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SYCE3A1L190 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SYCE3A1L190 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SYCE3A1L190 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SYCE3A1L190 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SYCE3A1L190 MIR21-201ENST00000362134 72 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SYCE3A1L190 SNORA9-201ENST00000384215 133 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 AL356057.2-201ENST00000403318 432 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.83□□□□□ -1.96
SYCE3A1L190 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.83□□□□□ -1.96
SYCE3A1L190 AC087499.2-201ENST00000432861 149 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 AC010153.1-201ENST00000432862 727 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.83□□□□□ -1.96
SYCE3A1L190 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.83□□□□□ -1.96
SYCE3A1L190 RPL7P36-201ENST00000444633 681 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.83□□□□□ -1.96
SYCE3A1L190 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.83□□□□□ -1.96
SYCE3A1L190 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.83□□□□□ -1.96
SYCE3A1L190 RPL26P9-201ENST00000457466 433 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 SNORD11.1-201ENST00000459482 85 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.83□□□□□ -1.96
SYCE3A1L190 AC034244.1-201ENST00000507687 207 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SYCE3A1L190 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.83□□□□□ -1.96
SYCE3A1L190 AP003467.2-201ENST00000520175 319 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.83□□□□□ -1.96
SYCE3A1L190 AC078814.3-201ENST00000553036 491 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.83□□□□□ -1.96
SYCE3A1L190 OR1M4P-201ENST00000589199 287 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 AC068790.3-201ENST00000602988 553 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 AL355877.2-201ENST00000603670 358 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 AC004805.2-201ENST00000605382 482 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 AC013244.3-201ENST00000605614 388 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SYCE3A1L190 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.83□□□□□ -1.96
SYCE3A1L190 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SYCE3A1L190 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SYCE3A1L190 AL391994.1-201ENST00000254724 282 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 Y_RNA.245-201ENST00000364493 95 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.82□□□□□ -1.96
SYCE3A1L190 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SYCE3A1L190 BPY2DP-201ENST00000422208 265 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 AL022400.1-201ENST00000423946 935 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.82□□□□□ -1.96
SYCE3A1L190 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.82□□□□□ -1.96
SYCE3A1L190 RPS15AP5-201ENST00000436276 388 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 AL671855.1-201ENST00000446875 1203 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.82□□□□□ -1.96
SYCE3A1L190 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.82□□□□□ -1.96
SYCE3A1L190 RPL23AP70-201ENST00000483361 460 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.82□□□□□ -1.96
SYCE3A1L190 AC112673.1-201ENST00000513168 575 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 RN7SKP40-201ENST00000517211 242 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.82□□□□□ -1.96
SYCE3A1L190 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.82□□□□□ -1.96
SYCE3A1L190 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.82□□□□□ -1.96
SYCE3A1L190 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.82□□□□□ -1.96
SYCE3A1L190 AC007336.1-201ENST00000576365 3828 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 AC103810.1-201ENST00000579873 453 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 AC090616.3-201ENST00000582184 217 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 MIR4999-201ENST00000585029 91 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 DPPA3P3-201ENST00000603842 430 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 AL031281.1-201ENST00000604049 488 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 AL161734.1-201ENST00000609720 557 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 AC034102.8-201ENST00000615146 484 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 AL607023.1-201ENST00000620045 248 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.82□□□□□ -1.96
SYCE3A1L190 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.82□□□□□ -1.96
SYCE3A1L190 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.82□□□□□ -1.96
SYCE3A1L190 MTND5P29-201ENST00000458676 1807 ntBASIC2.82□□□□□ -1.96
SYCE3A1L190 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
SYCE3A1L190 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
SYCE3A1L190 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
SYCE3A1L190 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.81□□□□□ -1.96
SYCE3A1L190 AC005336.3-201ENST00000623833 2679 ntBASIC2.81□□□□□ -1.96
SYCE3A1L190 SNORD62.1-201ENST00000362541 86 ntBASIC2.81□□□□□ -1.96
SYCE3A1L190 RNU6-1167P-201ENST00000363227 94 ntBASIC2.81□□□□□ -1.96
SYCE3A1L190 RNU6-778P-201ENST00000363269 103 ntBASIC2.81□□□□□ -1.96
SYCE3A1L190 RNU1-140P-201ENST00000365040 165 ntBASIC2.81□□□□□ -1.96
SYCE3A1L190 AC078974.1-201ENST00000411597 223 ntBASIC2.81□□□□□ -1.96
SYCE3A1L190 Z92545.1-201ENST00000411782 234 ntBASIC2.81□□□□□ -1.96
SYCE3A1L190 AF274854.1-201ENST00000413236 615 ntBASIC2.81□□□□□ -1.96
SYCE3A1L190 VPS26BP1-201ENST00000417155 755 ntBASIC2.81□□□□□ -1.96
SYCE3A1L190 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.81□□□□□ -1.96
SYCE3A1L190 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.81□□□□□ -1.96
SYCE3A1L190 SKA2P1-201ENST00000425592 390 ntBASIC2.81□□□□□ -1.96
SYCE3A1L190 MTND1P20-201ENST00000430341 950 ntBASIC2.81□□□□□ -1.96
SYCE3A1L190 AC092427.1-202ENST00000430569 476 ntBASIC2.81□□□□□ -1.96
SYCE3A1L190 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.81□□□□□ -1.96
SYCE3A1L190 AL135938.1-201ENST00000443141 297 ntBASIC2.81□□□□□ -1.96
SYCE3A1L190 CECR9-201ENST00000453421 199 ntBASIC2.81□□□□□ -1.96
SYCE3A1L190 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.81□□□□□ -1.96
SYCE3A1L190 RPL23AP41-201ENST00000484754 458 ntBASIC2.81□□□□□ -1.96
SYCE3A1L190 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.81□□□□□ -1.96
SYCE3A1L190 SNORA31.3-201ENST00000516029 96 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms