Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 DEFB108D-201ENST00000527787 222 ntBASIC1.07□□□□□ -2.24
TRAV30A0A087WSZ9 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV30A0A087WSZ9 AC015720.1-201ENST00000565251 277 ntBASIC1.07□□□□□ -2.24
TRAV30A0A087WSZ9 AC097504.2-201ENST00000608088 454 ntBASIC1.07□□□□□ -2.24
TRAV30A0A087WSZ9 AC135803.1-201ENST00000608748 565 ntBASIC1.07□□□□□ -2.24
TRAV30A0A087WSZ9 FRG1HP-204ENST00000617940 757 ntBASIC1.07□□□□□ -2.24
TRAV30A0A087WSZ9 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.07□□□□□ -2.24
TRAV30A0A087WSZ9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 SNORD26-201ENST00000384147 75 ntBASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 AC016769.3-201ENST00000396562 315 ntBASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 RNU2-41P-201ENST00000410991 178 ntBASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 SFR1P2-201ENST00000421841 730 ntBASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 OOSP1P1-201ENST00000423265 274 ntBASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 HMGB1P27-201ENST00000431429 603 ntBASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 SNORD13-201ENST00000459299 104 ntBASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 HMGB1P36-201ENST00000487709 576 ntBASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 RNU6-1095P-201ENST00000516148 108 ntBASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 AC107953.1-201ENST00000522216 297 ntBASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 AL031274.2-201ENST00000599419 203 ntBASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 RMST_6.1-201ENST00000611980 203 ntBASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 AC008443.7-201ENST00000622195 246 ntBASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 AC040168.1-201ENST00000623594 991 ntBASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 AC068620.4-201ENST00000636730 1182 ntBASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 ZNF209P-201ENST00000593450 2304 ntBASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV30A0A087WSZ9 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 ZNF72P-201ENST00000425869 1908 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 AL590084.1-201ENST00000407885 387 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 CYCSP49-201ENST00000420810 319 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 MTND4LP10-201ENST00000435146 291 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 AC241584.1-201ENST00000438469 1241 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 DDX3P2-201ENST00000446138 111 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 MTCO1P48-201ENST00000448024 1096 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 AC093801.2-201ENST00000503966 1050 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 HAUS1P3-201ENST00000523909 662 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 DUXAP5-201ENST00000529668 529 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 AC023813.2-201ENST00000564321 469 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 AC074051.3-201ENST00000570238 358 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 AP001485.1-201ENST00000604799 199 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 AL590410.1-201ENST00000617925 333 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 AC006338.1-201ENST00000618453 749 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 AC091953.2-201ENST00000623979 160 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 AC092192.1-201ENST00000633154 1018 ntBASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
TRAV30A0A087WSZ9 AP000776.1-201ENST00000530032 1663 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 RNU4-13P-201ENST00000364019 141 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 RNU6-730P-201ENST00000383954 104 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 RNU6-748P-201ENST00000384648 107 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 SPA17P1-201ENST00000416656 452 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 Z85994.2-201ENST00000434327 452 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 AL392003.1-201ENST00000434394 243 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 AC008379.1-201ENST00000463655 464 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 AC113398.2-201ENST00000507630 558 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 RNU1-92P-201ENST00000517017 135 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 AC011611.5-201ENST00000552477 578 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 IMMP1LP2-201ENST00000552954 492 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 AC105245.1-201ENST00000581934 244 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 HMGN2P15-201ENST00000585707 270 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 AP001269.3-201ENST00000588718 329 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 AL138478.1-201ENST00000612252 832 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 AC021755.4-201ENST00000616620 456 ntBASIC1.04□□□□□ -2.24
TRAV30A0A087WSZ9 MIR30A-201ENST00000385092 71 ntBASIC1.03□□□□□ -2.24
TRAV30A0A087WSZ9 MIR325-201ENST00000385260 98 ntBASIC1.03□□□□□ -2.24
TRAV30A0A087WSZ9 SNORA40.19-201ENST00000390846 128 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms