Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Phf7-203ENSMUST00000226565 1971 ntBASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3550W4VSN7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Gm18115-201ENSMUST00000221209 621 ntBASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Actl10-202ENSMUST00000226583 1501 ntBASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3550W4VSN7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Gm7213-201ENSMUST00000215977 950 ntBASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Gm3550W4VSN7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Gm3550W4VSN7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Gm3550W4VSN7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Gm3550W4VSN7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Gm3550W4VSN7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Gm3550W4VSN7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Gm3550W4VSN7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Gm3550W4VSN7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Gm3550W4VSN7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms