Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmg20bQ9Z104 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmg20bQ9Z104 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmg20bQ9Z104 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hmg20bQ9Z104 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmg20bQ9Z104 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hmg20bQ9Z104 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hmg20bQ9Z104 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmg20bQ9Z104 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 AA414768-201ENSMUST00000121924 1257 ntBASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20bQ9Z104 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Gm29518-201ENSMUST00000190858 372 ntBASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Gm17808-201ENSMUST00000200859 894 ntBASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20bQ9Z104 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hmg20bQ9Z104 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Hmg20bQ9Z104 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmg20bQ9Z104 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.13■□□□□ 0.65
Hmg20bQ9Z104 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hmg20bQ9Z104 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmg20bQ9Z104 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmg20bQ9Z104 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmg20bQ9Z104 Gm45328-201ENSMUST00000210942 917 ntBASIC19.13■□□□□ 0.65
Hmg20bQ9Z104 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hmg20bQ9Z104 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmg20bQ9Z104 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hmg20bQ9Z104 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms