Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 Gm43514-201ENSMUST00000198852 424 ntBASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Gm10060-201ENSMUST00000212002 111 ntBASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcb1Q9Z0H3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Gm2651-201ENSMUST00000203560 838 ntBASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcb1Q9Z0H3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcb1Q9Z0H3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcb1Q9Z0H3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcb1Q9Z0H3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Smarcb1Q9Z0H3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Smarcb1Q9Z0H3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcb1Q9Z0H3 Gm25990-201ENSMUST00000102440 86 ntBASIC16.77■□□□□ 0.28
Smarcb1Q9Z0H3 Gm13216-201ENSMUST00000117145 591 ntBASIC16.77■□□□□ 0.28
Smarcb1Q9Z0H3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.77■□□□□ 0.28
Smarcb1Q9Z0H3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.77■□□□□ 0.28
Smarcb1Q9Z0H3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcb1Q9Z0H3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcb1Q9Z0H3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcb1Q9Z0H3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.77■□□□□ 0.28
Smarcb1Q9Z0H3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcb1Q9Z0H3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.77■□□□□ 0.28
Smarcb1Q9Z0H3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcb1Q9Z0H3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Smarcb1Q9Z0H3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Smarcb1Q9Z0H3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Smarcb1Q9Z0H3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcb1Q9Z0H3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcb1Q9Z0H3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcb1Q9Z0H3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.76■□□□□ 0.27
Smarcb1Q9Z0H3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms