Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Clcn5Q9WVD4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn5Q9WVD4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn5Q9WVD4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn5Q9WVD4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn5Q9WVD4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Clcn5Q9WVD4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.77■□□□□ 0.28
Clcn5Q9WVD4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Clcn5Q9WVD4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.77■□□□□ 0.28
Clcn5Q9WVD4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn5Q9WVD4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn5Q9WVD4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn5Q9WVD4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn5Q9WVD4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn5Q9WVD4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Clcn5Q9WVD4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.77■□□□□ 0.28
Clcn5Q9WVD4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Clcn5Q9WVD4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clcn5Q9WVD4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clcn5Q9WVD4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Gm15165-201ENSMUST00000118140 502 ntBASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn5Q9WVD4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Gm27000-201ENSMUST00000182943 842 ntBASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn5Q9WVD4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Gm24513-201ENSMUST00000174964 138 ntBASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Gm27867-201ENSMUST00000184778 125 ntBASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Gm10576-201ENSMUST00000191927 825 ntBASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.74■□□□□ 0.27
Clcn5Q9WVD4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms