Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Gm15165-201ENSMUST00000118140 502 ntBASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Gm15590-201ENSMUST00000078419 552 ntBASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Mir8112-201ENSMUST00000184382 131 ntBASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Gm8969-201ENSMUST00000199694 526 ntBASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col13a1Q9R1N9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Gm13312-201ENSMUST00000119631 718 ntBASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Gm14057-201ENSMUST00000120631 482 ntBASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col13a1Q9R1N9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.77□□□□□ -0.2
Col13a1Q9R1N9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.77□□□□□ -0.2
Col13a1Q9R1N9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.77□□□□□ -0.2
Col13a1Q9R1N9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Col13a1Q9R1N9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col13a1Q9R1N9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Col13a1Q9R1N9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.77□□□□□ -0.2
Col13a1Q9R1N9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms