Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn2Q9R0A1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Mir1668-201ENSMUST00000184114 107 ntBASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn2Q9R0A1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Gm6659-201ENSMUST00000174752 547 ntBASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn2Q9R0A1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clcn2Q9R0A1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clcn2Q9R0A1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Clcn2Q9R0A1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.58■□□□□ 0.25
Clcn2Q9R0A1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clcn2Q9R0A1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn2Q9R0A1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn2Q9R0A1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
Clcn2Q9R0A1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.58■□□□□ 0.24
Clcn2Q9R0A1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Clcn2Q9R0A1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn2Q9R0A1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.58■□□□□ 0.24
Clcn2Q9R0A1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn2Q9R0A1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn2Q9R0A1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms