Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Gm26039-201ENSMUST00000158152 144 ntBASIC14.42□□□□□ -0.1
Nubp2Q9R061 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.42□□□□□ -0.1
Nubp2Q9R061 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nubp2Q9R061 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp2Q9R061 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Gm11355-201ENSMUST00000121120 306 ntBASIC14.41□□□□□ -0.1
Nubp2Q9R061 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Gm33142-201ENSMUST00000193913 867 ntBASIC14.41□□□□□ -0.1
Nubp2Q9R061 Gm5587-201ENSMUST00000206270 674 ntBASIC14.41□□□□□ -0.1
Nubp2Q9R061 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nubp2Q9R061 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.41□□□□□ -0.1
Nubp2Q9R061 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp2Q9R061 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.4□□□□□ -0.1
Nubp2Q9R061 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nubp2Q9R061 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Nubp2Q9R061 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp2Q9R061 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp2Q9R061 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nubp2Q9R061 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp2Q9R061 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.39□□□□□ -0.11
Nubp2Q9R061 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp2Q9R061 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp2Q9R061 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp2Q9R061 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp2Q9R061 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp2Q9R061 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp2Q9R061 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms