Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six6Q9QZ28 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Six6Q9QZ28 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Six6Q9QZ28 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six6Q9QZ28 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six6Q9QZ28 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Six6Q9QZ28 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Six6Q9QZ28 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six6Q9QZ28 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Six6Q9QZ28 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Six6Q9QZ28 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Six6Q9QZ28 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Six6Q9QZ28 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Six6Q9QZ28 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Six6Q9QZ28 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six6Q9QZ28 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Six6Q9QZ28 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.83□□□□□ -0.2
Six6Q9QZ28 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Six6Q9QZ28 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.82□□□□□ -0.2
Six6Q9QZ28 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Six6Q9QZ28 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.82□□□□□ -0.2
Six6Q9QZ28 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.82□□□□□ -0.2
Six6Q9QZ28 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six6Q9QZ28 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.81□□□□□ -0.2
Six6Q9QZ28 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.81□□□□□ -0.2
Six6Q9QZ28 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Gm6576-201ENSMUST00000169678 883 ntBASIC13.81□□□□□ -0.2
Six6Q9QZ28 Gm45417-201ENSMUST00000209533 758 ntBASIC13.81□□□□□ -0.2
Six6Q9QZ28 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six6Q9QZ28 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms