Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rfx5Q9JL61 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Rfx5Q9JL61 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx5Q9JL61 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx5Q9JL61 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Rfx5Q9JL61 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx5Q9JL61 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx5Q9JL61 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.14■□□□□ 0.33
Rfx5Q9JL61 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.14■□□□□ 0.33
Rfx5Q9JL61 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.14■□□□□ 0.33
Rfx5Q9JL61 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.14■□□□□ 0.33
Rfx5Q9JL61 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.14■□□□□ 0.33
Rfx5Q9JL61 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx5Q9JL61 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx5Q9JL61 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rfx5Q9JL61 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx5Q9JL61 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx5Q9JL61 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx5Q9JL61 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Mir6404-201ENSMUST00000183699 94 ntBASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Gm27867-201ENSMUST00000184778 125 ntBASIC17.13■□□□□ 0.33
Rfx5Q9JL61 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx5Q9JL61 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Gm17971-201ENSMUST00000190239 806 ntBASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx5Q9JL61 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Gm34391-201ENSMUST00000203706 907 ntBASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx5Q9JL61 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx5Q9JL61 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms