Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpne8Q9DC53 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.97■□□□□ 0.31
Cpne8Q9DC53 Prob1-201ENSMUST00000097619 3021 ntBASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 App-207ENSMUST00000227737 2827 ntBASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Gm22697-201ENSMUST00000175194 63 ntBASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpne8Q9DC53 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cpne8Q9DC53 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cpne8Q9DC53 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.95■□□□□ 0.3
Cpne8Q9DC53 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.95■□□□□ 0.3
Cpne8Q9DC53 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.95■□□□□ 0.3
Cpne8Q9DC53 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpne8Q9DC53 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne8Q9DC53 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne8Q9DC53 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms