Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssmem1Q9D9Y8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssmem1Q9D9Y8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssmem1Q9D9Y8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssmem1Q9D9Y8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssmem1Q9D9Y8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssmem1Q9D9Y8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssmem1Q9D9Y8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssmem1Q9D9Y8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ssmem1Q9D9Y8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssmem1Q9D9Y8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssmem1Q9D9Y8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssmem1Q9D9Y8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssmem1Q9D9Y8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssmem1Q9D9Y8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssmem1Q9D9Y8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Gm28033-201ENSMUST00000184224 96 ntBASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssmem1Q9D9Y8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 AC153794.1-201ENSMUST00000169148 126 ntBASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssmem1Q9D9Y8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms