Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk3bl1Q9D701 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Upk3bl1Q9D701 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk3bl1Q9D701 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk3bl1Q9D701 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk3bl1Q9D701 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Gm15375-201ENSMUST00000119510 849 ntBASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Gm6211-202ENSMUST00000167849 925 ntBASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Gm5408-201ENSMUST00000197998 747 ntBASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Upk3bl1Q9D701 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Upk3bl1Q9D701 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.8□□□□□ -0.04
Upk3bl1Q9D701 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bl1Q9D701 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bl1Q9D701 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Upk3bl1Q9D701 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bl1Q9D701 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.79□□□□□ -0.04
Upk3bl1Q9D701 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bl1Q9D701 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bl1Q9D701 Gm27000-201ENSMUST00000182943 842 ntBASIC14.79□□□□□ -0.04
Upk3bl1Q9D701 Gm18558-201ENSMUST00000186253 1214 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms