Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc7Q9D541 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc7Q9D541 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc7Q9D541 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
Ccdc7Q9D541 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19■□□□□ 0.63
Ccdc7Q9D541 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc7Q9D541 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Ccdc7Q9D541 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc7Q9D541 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19■□□□□ 0.63
Ccdc7Q9D541 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19■□□□□ 0.63
Ccdc7Q9D541 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19■□□□□ 0.63
Ccdc7Q9D541 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc7Q9D541 Gm6858-201ENSMUST00000208582 1468 ntBASIC19■□□□□ 0.63
Ccdc7Q9D541 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc7Q9D541 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc7Q9D541 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc7Q9D541 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc7Q9D541 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Ccdc7Q9D541 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc7Q9D541 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc7Q9D541 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc7Q9D541 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc7Q9D541 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc7Q9D541 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc7Q9D541 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc7Q9D541 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc7Q9D541 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc7Q9D541 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.99■□□□□ 0.63
Ccdc7Q9D541 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc7Q9D541 Gm21559-201ENSMUST00000220638 855 ntBASIC18.99■□□□□ 0.63
Ccdc7Q9D541 Gm8587-201ENSMUST00000076538 843 ntBASIC18.99■□□□□ 0.63
Ccdc7Q9D541 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc7Q9D541 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc7Q9D541 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc7Q9D541 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc7Q9D541 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc7Q9D541 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc7Q9D541 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Gm15565-201ENSMUST00000118890 427 ntBASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms