Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Gm42642-201ENSMUST00000200683 355 ntBASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tmem88Q9D0N8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tmem88Q9D0N8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Tmem88Q9D0N8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tmem88Q9D0N8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
Tmem88Q9D0N8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tmem88Q9D0N8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tmem88Q9D0N8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms