Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm12859-201ENSMUST00000117834 427 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm4518-201ENSMUST00000182638 718 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Lysmd1Q9D0E3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Lysmd1Q9D0E3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Lysmd1Q9D0E3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Lysmd1Q9D0E3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd1Q9D0E3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Lysmd1Q9D0E3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd1Q9D0E3 Gm12138-201ENSMUST00000122180 951 ntBASIC17.32■□□□□ 0.36
Lysmd1Q9D0E3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.32■□□□□ 0.36
Lysmd1Q9D0E3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd1Q9D0E3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Lysmd1Q9D0E3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd1Q9D0E3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd1Q9D0E3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd1Q9D0E3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd1Q9D0E3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd1Q9D0E3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd1Q9D0E3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 Gm15487-201ENSMUST00000122373 465 ntBASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd1Q9D0E3 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 Gm18489-201ENSMUST00000172565 551 ntBASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 Gm8515-201ENSMUST00000194852 576 ntBASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 Gm45059-201ENSMUST00000205558 1077 ntBASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 Gm6180-201ENSMUST00000065243 498 ntBASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd1Q9D0E3 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.29■□□□□ 0.36
Lysmd1Q9D0E3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lysmd1Q9D0E3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.29■□□□□ 0.36
Lysmd1Q9D0E3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.29■□□□□ 0.36
Lysmd1Q9D0E3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd1Q9D0E3 AY702102-202ENSMUST00000194651 1173 ntBASIC17.29■□□□□ 0.36
Lysmd1Q9D0E3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd1Q9D0E3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd1Q9D0E3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd1Q9D0E3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms