Protein–RNA interactions for Protein: Q9CZB3

Thumpd2, THUMP domain-containing protein 2, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd2Q9CZB3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.05■□□□□ 0.32
Thumpd2Q9CZB3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Thumpd2Q9CZB3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd2Q9CZB3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd2Q9CZB3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd2Q9CZB3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd2Q9CZB3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd2Q9CZB3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Gm7889-201ENSMUST00000185591 958 ntBASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Gm18959-201ENSMUST00000208954 655 ntBASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd2Q9CZB3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Gm36967-201ENSMUST00000193814 266 ntBASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd2Q9CZB3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Thumpd2Q9CZB3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Thumpd2Q9CZB3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Thumpd2Q9CZB3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Thumpd2Q9CZB3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Thumpd2Q9CZB3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Thumpd2Q9CZB3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd2Q9CZB3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd2Q9CZB3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd2Q9CZB3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd2Q9CZB3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd2Q9CZB3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd2Q9CZB3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd2Q9CZB3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd2Q9CZB3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd2Q9CZB3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd2Q9CZB3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms