Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Smad6-203ENSMUST00000179458 273 ntBASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn1Q9CWM4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Pfdn1Q9CWM4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn1Q9CWM4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms