Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.59■□□□□ 0.25
Cldnd1Q9CQX5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cldnd1Q9CQX5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cldnd1Q9CQX5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gm8825-201ENSMUST00000182565 998 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gm4518-201ENSMUST00000182638 718 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gm27321-201ENSMUST00000185021 205 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Cldnd1Q9CQX5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Gm4899-201ENSMUST00000178708 719 ntBASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Gm37153-201ENSMUST00000193637 231 ntBASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldnd1Q9CQX5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms