Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.12■□□□□ 0.17
Trim33Q99PP7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Gm13216-201ENSMUST00000117145 591 ntBASIC16.12■□□□□ 0.17
Trim33Q99PP7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.12■□□□□ 0.17
Trim33Q99PP7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim33Q99PP7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Gm5587-201ENSMUST00000206270 674 ntBASIC16.12■□□□□ 0.17
Trim33Q99PP7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim33Q99PP7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim33Q99PP7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Gm29707-201ENSMUST00000196325 491 ntBASIC16.11■□□□□ 0.17
Trim33Q99PP7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim33Q99PP7 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.11■□□□□ 0.17
Trim33Q99PP7 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.11■□□□□ 0.17
Trim33Q99PP7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.1■□□□□ 0.17
Trim33Q99PP7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim33Q99PP7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim33Q99PP7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms