Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Gm14140-201ENSMUST00000119999 995 ntBASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 Gm27628-201ENSMUST00000184911 107 ntBASIC19.98■□□□□ 0.79
Trim34aQ99PP6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34aQ99PP6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34aQ99PP6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34aQ99PP6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34aQ99PP6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34aQ99PP6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34aQ99PP6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34aQ99PP6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34aQ99PP6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34aQ99PP6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34aQ99PP6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.97■□□□□ 0.79
Trim34aQ99PP6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim34aQ99PP6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Trim34aQ99PP6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34aQ99PP6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34aQ99PP6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34aQ99PP6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.97■□□□□ 0.79
Trim34aQ99PP6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34aQ99PP6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim34aQ99PP6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim34aQ99PP6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trim34aQ99PP6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim34aQ99PP6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trim34aQ99PP6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim34aQ99PP6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim34aQ99PP6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim34aQ99PP6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim34aQ99PP6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim34aQ99PP6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim34aQ99PP6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34aQ99PP6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34aQ99PP6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34aQ99PP6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34aQ99PP6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34aQ99PP6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34aQ99PP6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34aQ99PP6 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34aQ99PP6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.94■□□□□ 0.78
Trim34aQ99PP6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34aQ99PP6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms