Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Raf1Q99N57 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Raf1Q99N57 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Raf1Q99N57 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Raf1Q99N57 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
Raf1Q99N57 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Raf1Q99N57 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Raf1Q99N57 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Raf1Q99N57 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Raf1Q99N57 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Raf1Q99N57 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Raf1Q99N57 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Raf1Q99N57 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.6□□□□□ -0.07
Raf1Q99N57 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Raf1Q99N57 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Raf1Q99N57 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.6□□□□□ -0.07
Raf1Q99N57 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Raf1Q99N57 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.6□□□□□ -0.07
Raf1Q99N57 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Raf1Q99N57 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Raf1Q99N57 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.6□□□□□ -0.07
Raf1Q99N57 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Raf1Q99N57 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.59□□□□□ -0.07
Raf1Q99N57 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.59□□□□□ -0.07
Raf1Q99N57 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.59□□□□□ -0.07
Raf1Q99N57 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.59□□□□□ -0.07
Raf1Q99N57 Gm18959-201ENSMUST00000208954 655 ntBASIC14.59□□□□□ -0.07
Raf1Q99N57 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.59□□□□□ -0.07
Raf1Q99N57 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Raf1Q99N57 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Raf1Q99N57 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
Raf1Q99N57 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Raf1Q99N57 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Raf1Q99N57 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Raf1Q99N57 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
Raf1Q99N57 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
Raf1Q99N57 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
Raf1Q99N57 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Raf1Q99N57 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Raf1Q99N57 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Raf1Q99N57 Gm27741-201ENSMUST00000185060 237 ntBASIC14.58□□□□□ -0.08
Raf1Q99N57 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.58□□□□□ -0.08
Raf1Q99N57 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Raf1Q99N57 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Raf1Q99N57 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Raf1Q99N57 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Raf1Q99N57 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Raf1Q99N57 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms