Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1aQ921W0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1aQ921W0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1aQ921W0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1aQ921W0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1aQ921W0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1aQ921W0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.39□□□□□ -0.11
Chmp1aQ921W0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1aQ921W0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1aQ921W0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.39□□□□□ -0.11
Chmp1aQ921W0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1aQ921W0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1aQ921W0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Chmp1aQ921W0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1aQ921W0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.39□□□□□ -0.11
Chmp1aQ921W0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Chmp1aQ921W0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1aQ921W0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1aQ921W0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Chmp1aQ921W0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1aQ921W0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Prob1-201ENSMUST00000097619 3021 ntBASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1aQ921W0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms