Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhac2Q91Y09 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.58■□□□□ 0.4
Pcdhac2Q91Y09 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.58■□□□□ 0.4
Pcdhac2Q91Y09 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhac2Q91Y09 Gm27646-201ENSMUST00000183989 110 ntBASIC17.58■□□□□ 0.4
Pcdhac2Q91Y09 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdhac2Q91Y09 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhac2Q91Y09 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhac2Q91Y09 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhac2Q91Y09 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhac2Q91Y09 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhac2Q91Y09 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhac2Q91Y09 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Gm5682-201ENSMUST00000173402 505 ntBASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhac2Q91Y09 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Gm6736-201ENSMUST00000166583 948 ntBASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Gm18622-201ENSMUST00000219361 595 ntBASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac2Q91Y09 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhac2Q91Y09 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac2Q91Y09 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdhac2Q91Y09 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhac2Q91Y09 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhac2Q91Y09 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhac2Q91Y09 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhac2Q91Y09 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac2Q91Y09 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac2Q91Y09 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac2Q91Y09 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac2Q91Y09 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac2Q91Y09 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhac2Q91Y09 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac2Q91Y09 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.55■□□□□ 0.4
Pcdhac2Q91Y09 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac2Q91Y09 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac2Q91Y09 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Gm7222-201ENSMUST00000117512 906 ntBASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhac2Q91Y09 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms