Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Mir5122-201ENSMUST00000175004 89 ntBASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Gm43183-201ENSMUST00000200632 547 ntBASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Gm42545-201ENSMUST00000202755 922 ntBASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb3Q91XZ7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Gm19087-201ENSMUST00000191430 946 ntBASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb3Q91XZ7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb3Q91XZ7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms