Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgc5Q91XW9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgc5Q91XW9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhgc5Q91XW9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgc5Q91XW9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Pcdhgc5Q91XW9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgc5Q91XW9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgc5Q91XW9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgc5Q91XW9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgc5Q91XW9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgc5Q91XW9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc5Q91XW9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Pcdhgc5Q91XW9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdhgc5Q91XW9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 Gm44450-201ENSMUST00000199528 114 ntBASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc5Q91XW9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc5Q91XW9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms