Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.06■□□□□ 0.16
Vsx1Q91V10 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vsx1Q91V10 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vsx1Q91V10 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.05■□□□□ 0.16
Vsx1Q91V10 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.05■□□□□ 0.16
Vsx1Q91V10 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Vsx1Q91V10 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vsx1Q91V10 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.04■□□□□ 0.16
Vsx1Q91V10 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.04■□□□□ 0.16
Vsx1Q91V10 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.04■□□□□ 0.16
Vsx1Q91V10 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vsx1Q91V10 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vsx1Q91V10 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Gm13036-201ENSMUST00000117799 748 ntBASIC16.03■□□□□ 0.16
Vsx1Q91V10 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Gm6550-201ENSMUST00000187574 993 ntBASIC16.03■□□□□ 0.16
Vsx1Q91V10 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Gm10175-201ENSMUST00000086013 645 ntBASIC16.03■□□□□ 0.16
Vsx1Q91V10 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Vsx1Q91V10 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Vsx1Q91V10 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vsx1Q91V10 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vsx1Q91V10 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vsx1Q91V10 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vsx1Q91V10 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.02■□□□□ 0.16
Vsx1Q91V10 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vsx1Q91V10 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Vsx1Q91V10 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vsx1Q91V10 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vsx1Q91V10 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vsx1Q91V10 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms