Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Gm10052-201ENSMUST00000168019 960 ntBASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Gm7729-201ENSMUST00000050143 801 ntBASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Birc2-201ENSMUST00000054878 378 ntBASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.31■□□□□ 0.04
Ndc1Q8VCB1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc1Q8VCB1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc1Q8VCB1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc1Q8VCB1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ndc1Q8VCB1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc1Q8VCB1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc1Q8VCB1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.29■□□□□ 0.04
Ndc1Q8VCB1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ndc1Q8VCB1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc1Q8VCB1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc1Q8VCB1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc1Q8VCB1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.29■□□□□ 0.04
Ndc1Q8VCB1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.29■□□□□ 0.04
Ndc1Q8VCB1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc1Q8VCB1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ndc1Q8VCB1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc1Q8VCB1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc1Q8VCB1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc1Q8VCB1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms