Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Gm6345-202ENSMUST00000180900 204 ntBASIC19.46■□□□□ 0.71
Top1mtQ8R4U6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.46■□□□□ 0.71
Top1mtQ8R4U6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Top1mtQ8R4U6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Top1mtQ8R4U6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Top1mtQ8R4U6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Top1mtQ8R4U6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Top1mtQ8R4U6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Top1mtQ8R4U6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.46■□□□□ 0.71
Top1mtQ8R4U6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Top1mtQ8R4U6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.46■□□□□ 0.71
Top1mtQ8R4U6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Top1mtQ8R4U6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Top1mtQ8R4U6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.45■□□□□ 0.7
Top1mtQ8R4U6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Top1mtQ8R4U6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Top1mtQ8R4U6 Gm6659-201ENSMUST00000174752 547 ntBASIC19.45■□□□□ 0.7
Top1mtQ8R4U6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Top1mtQ8R4U6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.45■□□□□ 0.7
Top1mtQ8R4U6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Top1mtQ8R4U6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.45■□□□□ 0.7
Top1mtQ8R4U6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.45■□□□□ 0.7
Top1mtQ8R4U6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Top1mtQ8R4U6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Top1mtQ8R4U6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Top1mtQ8R4U6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Top1mtQ8R4U6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Gm23634-201ENSMUST00000175071 91 ntBASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top1mtQ8R4U6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Top1mtQ8R4U6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Top1mtQ8R4U6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Top1mtQ8R4U6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Top1mtQ8R4U6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Top1mtQ8R4U6 Gm10052-201ENSMUST00000168019 960 ntBASIC19.43■□□□□ 0.7
Top1mtQ8R4U6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Top1mtQ8R4U6 Gm7729-201ENSMUST00000050143 801 ntBASIC19.43■□□□□ 0.7
Top1mtQ8R4U6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Top1mtQ8R4U6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Top1mtQ8R4U6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Top1mtQ8R4U6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Top1mtQ8R4U6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Top1mtQ8R4U6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Top1mtQ8R4U6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Top1mtQ8R4U6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Top1mtQ8R4U6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Top1mtQ8R4U6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Top1mtQ8R4U6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.42■□□□□ 0.7
Top1mtQ8R4U6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Top1mtQ8R4U6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Top1mtQ8R4U6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Top1mtQ8R4U6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Top1mtQ8R4U6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Top1mtQ8R4U6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Top1mtQ8R4U6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Top1mtQ8R4U6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Top1mtQ8R4U6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Top1mtQ8R4U6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Top1mtQ8R4U6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Top1mtQ8R4U6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Top1mtQ8R4U6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Top1mtQ8R4U6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Top1mtQ8R4U6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top1mtQ8R4U6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top1mtQ8R4U6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top1mtQ8R4U6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Top1mtQ8R4U6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top1mtQ8R4U6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Top1mtQ8R4U6 Gm44430-201ENSMUST00000203376 995 ntBASIC19.41■□□□□ 0.7
Top1mtQ8R4U6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Top1mtQ8R4U6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top1mtQ8R4U6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top1mtQ8R4U6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top1mtQ8R4U6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top1mtQ8R4U6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Top1mtQ8R4U6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top1mtQ8R4U6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
Top1mtQ8R4U6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Top1mtQ8R4U6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Top1mtQ8R4U6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Top1mtQ8R4U6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Top1mtQ8R4U6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Top1mtQ8R4U6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms