Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.47■□□□□ 0.23
Slf1Q8R3P9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.47■□□□□ 0.23
Slf1Q8R3P9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Gm42545-201ENSMUST00000202755 922 ntBASIC16.47■□□□□ 0.23
Slf1Q8R3P9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Slf1Q8R3P9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slf1Q8R3P9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Slf1Q8R3P9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Slf1Q8R3P9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Slf1Q8R3P9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slf1Q8R3P9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slf1Q8R3P9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slf1Q8R3P9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slf1Q8R3P9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slf1Q8R3P9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slf1Q8R3P9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.43■□□□□ 0.22
Slf1Q8R3P9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Slf1Q8R3P9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slf1Q8R3P9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.43■□□□□ 0.22
Slf1Q8R3P9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slf1Q8R3P9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms