Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Gm24841-201ENSMUST00000158676 357 ntBASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Gm17661-201ENSMUST00000170317 270 ntBASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.86□□□□□ -0.03
Ebf4Q8K4J2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Gm7290-201ENSMUST00000104990 617 ntBASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Gm12918-201ENSMUST00000120234 636 ntBASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Gm15710-201ENSMUST00000121821 636 ntBASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Gm5075-201ENSMUST00000196916 622 ntBASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Gm42642-201ENSMUST00000200683 355 ntBASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 BC037039-201ENSMUST00000192003 2205 ntBASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf4Q8K4J2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf4Q8K4J2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf4Q8K4J2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms