Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Rtn1Q8K0T0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Rtn1Q8K0T0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rtn1Q8K0T0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rtn1Q8K0T0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.77■□□□□ 0.59
Rtn1Q8K0T0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rtn1Q8K0T0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rtn1Q8K0T0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn1Q8K0T0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn1Q8K0T0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn1Q8K0T0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.76■□□□□ 0.59
Rtn1Q8K0T0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rtn1Q8K0T0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn1Q8K0T0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn1Q8K0T0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn1Q8K0T0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn1Q8K0T0 Gm7284-201ENSMUST00000131667 944 ntBASIC18.76■□□□□ 0.59
Rtn1Q8K0T0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.76■□□□□ 0.59
Rtn1Q8K0T0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rtn1Q8K0T0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn1Q8K0T0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn1Q8K0T0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn1Q8K0T0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn1Q8K0T0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rtn1Q8K0T0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn1Q8K0T0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn1Q8K0T0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn1Q8K0T0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn1Q8K0T0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn1Q8K0T0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn1Q8K0T0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn1Q8K0T0 Gm27704-201ENSMUST00000185094 107 ntBASIC18.75■□□□□ 0.59
Rtn1Q8K0T0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Rtn1Q8K0T0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn1Q8K0T0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rtn1Q8K0T0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Rtn1Q8K0T0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn1Q8K0T0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rtn1Q8K0T0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn1Q8K0T0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Gm37444-201ENSMUST00000193605 439 ntBASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn1Q8K0T0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn1Q8K0T0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn1Q8K0T0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn1Q8K0T0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn1Q8K0T0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rtn1Q8K0T0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rtn1Q8K0T0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn1Q8K0T0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn1Q8K0T0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn1Q8K0T0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn1Q8K0T0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn1Q8K0T0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn1Q8K0T0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Olfr129-201ENSMUST00000122318 993 ntBASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Gm27742-201ENSMUST00000184667 60 ntBASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn1Q8K0T0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rtn1Q8K0T0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn1Q8K0T0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn1Q8K0T0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms