Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clip4Q8CI96 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clip4Q8CI96 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clip4Q8CI96 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Clip4Q8CI96 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.39■□□□□ 0.21
Clip4Q8CI96 Gm27000-201ENSMUST00000182943 842 ntBASIC16.39■□□□□ 0.21
Clip4Q8CI96 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clip4Q8CI96 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clip4Q8CI96 AA414768-201ENSMUST00000121924 1257 ntBASIC16.38■□□□□ 0.21
Clip4Q8CI96 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.38■□□□□ 0.21
Clip4Q8CI96 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.38■□□□□ 0.21
Clip4Q8CI96 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Actl10-202ENSMUST00000226583 1501 ntBASIC16.38■□□□□ 0.21
Clip4Q8CI96 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.38■□□□□ 0.21
Clip4Q8CI96 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.37■□□□□ 0.21
Clip4Q8CI96 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Gm10566-201ENSMUST00000086739 996 ntBASIC16.37■□□□□ 0.21
Clip4Q8CI96 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms