Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.97■□□□□ 0.79
Smc4Q8CG47 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.97■□□□□ 0.79
Smc4Q8CG47 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Smc4Q8CG47 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.96■□□□□ 0.79
Smc4Q8CG47 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.96■□□□□ 0.79
Smc4Q8CG47 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc4Q8CG47 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
Smc4Q8CG47 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smc4Q8CG47 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Gm6376-201ENSMUST00000209407 580 ntBASIC19.95■□□□□ 0.78
Smc4Q8CG47 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.95■□□□□ 0.78
Smc4Q8CG47 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc4Q8CG47 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smc4Q8CG47 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Smc4Q8CG47 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc4Q8CG47 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc4Q8CG47 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc4Q8CG47 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.94■□□□□ 0.78
Smc4Q8CG47 Gm9172-201ENSMUST00000212092 954 ntBASIC19.94■□□□□ 0.78
Smc4Q8CG47 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.94■□□□□ 0.78
Smc4Q8CG47 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc4Q8CG47 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc4Q8CG47 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc4Q8CG47 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc4Q8CG47 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc4Q8CG47 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc4Q8CG47 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc4Q8CG47 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Smc4Q8CG47 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.93■□□□□ 0.78
Smc4Q8CG47 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smc4Q8CG47 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Smc4Q8CG47 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smc4Q8CG47 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smc4Q8CG47 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.93■□□□□ 0.78
Smc4Q8CG47 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.93■□□□□ 0.78
Smc4Q8CG47 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Smc4Q8CG47 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc4Q8CG47 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.93■□□□□ 0.78
Smc4Q8CG47 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Smc4Q8CG47 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms