Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf31Q8CCF0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf31Q8CCF0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf31Q8CCF0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf31Q8CCF0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf31Q8CCF0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf31Q8CCF0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.74■□□□□ 0.43
Prpf31Q8CCF0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf31Q8CCF0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf31Q8CCF0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf31Q8CCF0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf31Q8CCF0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.74■□□□□ 0.43
Prpf31Q8CCF0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf31Q8CCF0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf31Q8CCF0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf31Q8CCF0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf31Q8CCF0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Prpf31Q8CCF0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf31Q8CCF0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf31Q8CCF0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Prpf31Q8CCF0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf31Q8CCF0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.71■□□□□ 0.43
Prpf31Q8CCF0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf31Q8CCF0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Prpf31Q8CCF0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf31Q8CCF0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf31Q8CCF0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf31Q8CCF0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.71■□□□□ 0.43
Prpf31Q8CCF0 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.71■□□□□ 0.43
Prpf31Q8CCF0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf31Q8CCF0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Prpf31Q8CCF0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Prpf31Q8CCF0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Prpf31Q8CCF0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Prpf31Q8CCF0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Gm5864-201ENSMUST00000202263 970 ntBASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf31Q8CCF0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms