Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim9Q8C7M3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim9Q8C7M3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Gm11950-201ENSMUST00000121615 838 ntBASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim9Q8C7M3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim9Q8C7M3 Gm25016-201ENSMUST00000158399 131 ntBASIC17.91■□□□□ 0.46
Trim9Q8C7M3 Gm29518-201ENSMUST00000190858 372 ntBASIC17.91■□□□□ 0.46
Trim9Q8C7M3 Gm17808-201ENSMUST00000200859 894 ntBASIC17.91■□□□□ 0.46
Trim9Q8C7M3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim9Q8C7M3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim9Q8C7M3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim9Q8C7M3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim9Q8C7M3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim9Q8C7M3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim9Q8C7M3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim9Q8C7M3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim9Q8C7M3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim9Q8C7M3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim9Q8C7M3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim9Q8C7M3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim9Q8C7M3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 AA414768-201ENSMUST00000121924 1257 ntBASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms