Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gm36967-201ENSMUST00000193814 266 ntBASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.23■□□□□ 0.03
Ppp1r3eQ8BRJ4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gm44450-201ENSMUST00000199528 114 ntBASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ppp1r3eQ8BRJ4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gm18115-201ENSMUST00000221209 621 ntBASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ppp1r3eQ8BRJ4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ppp1r3eQ8BRJ4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ppp1r3eQ8BRJ4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ppp1r3eQ8BRJ4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms