Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Suds3Q8BR65 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Suds3Q8BR65 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.71■□□□□ 0.27
Suds3Q8BR65 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Suds3Q8BR65 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Suds3Q8BR65 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Suds3Q8BR65 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Suds3Q8BR65 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Suds3Q8BR65 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Suds3Q8BR65 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Suds3Q8BR65 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Suds3Q8BR65 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Suds3Q8BR65 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Suds3Q8BR65 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Suds3Q8BR65 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Suds3Q8BR65 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Suds3Q8BR65 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Suds3Q8BR65 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Gm7367-201ENSMUST00000057611 492 ntBASIC16.7■□□□□ 0.26
Suds3Q8BR65 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Suds3Q8BR65 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.7■□□□□ 0.26
Suds3Q8BR65 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Suds3Q8BR65 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Suds3Q8BR65 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Suds3Q8BR65 AA414768-201ENSMUST00000121924 1257 ntBASIC16.69■□□□□ 0.26
Suds3Q8BR65 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Suds3Q8BR65 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Suds3Q8BR65 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Gm13216-201ENSMUST00000117145 591 ntBASIC16.68■□□□□ 0.26
Suds3Q8BR65 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.68■□□□□ 0.26
Suds3Q8BR65 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Gm27389-201ENSMUST00000183622 195 ntBASIC16.68■□□□□ 0.26
Suds3Q8BR65 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Gm10566-201ENSMUST00000086739 996 ntBASIC16.68■□□□□ 0.26
Suds3Q8BR65 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Suds3Q8BR65 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms