Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4Q8BQZ5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Gm6345-202ENSMUST00000180900 204 ntBASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Gm27389-201ENSMUST00000183622 195 ntBASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4Q8BQZ5 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4Q8BQZ5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4Q8BQZ5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4Q8BQZ5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4Q8BQZ5 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4Q8BQZ5 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4Q8BQZ5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4Q8BQZ5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4Q8BQZ5 AA414768-201ENSMUST00000121924 1257 ntBASIC15.77■□□□□ 0.12
Cpsf4Q8BQZ5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4Q8BQZ5 Gm26039-201ENSMUST00000158152 144 ntBASIC15.77■□□□□ 0.12
Cpsf4Q8BQZ5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4Q8BQZ5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4Q8BQZ5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4Q8BQZ5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.77■□□□□ 0.11
Cpsf4Q8BQZ5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cpsf4Q8BQZ5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.77■□□□□ 0.11
Cpsf4Q8BQZ5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cpsf4Q8BQZ5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cpsf4Q8BQZ5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cpsf4Q8BQZ5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cpsf4Q8BQZ5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4Q8BQZ5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms