Protein–RNA interactions for Protein: Q8BPK2

Zcchc3, Zinc finger, CCHC domain-containing 3, mousemouse

Known RBP Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc3Q8BPK2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zcchc3Q8BPK2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zcchc3Q8BPK2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Zcchc3Q8BPK2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Zcchc3Q8BPK2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zcchc3Q8BPK2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Gm22697-201ENSMUST00000175194 63 ntBASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Zcchc3Q8BPK2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Gm18101-201ENSMUST00000215769 548 ntBASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Gm21559-201ENSMUST00000220638 855 ntBASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Gm8587-201ENSMUST00000076538 843 ntBASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Zcchc3Q8BPK2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Zcchc3Q8BPK2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Zcchc3Q8BPK2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Zcchc3Q8BPK2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Zcchc3Q8BPK2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Zcchc3Q8BPK2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Zcchc3Q8BPK2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Zcchc3Q8BPK2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Zcchc3Q8BPK2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.26■□□□□ 0.03
Zcchc3Q8BPK2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zcchc3Q8BPK2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Zcchc3Q8BPK2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zcchc3Q8BPK2 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.25■□□□□ 0.03
Zcchc3Q8BPK2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms