Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col16a1Q8BLX7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col16a1Q8BLX7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Gm43338-201ENSMUST00000198617 2223 ntBASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Gm45612-201ENSMUST00000211320 160 ntBASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col16a1Q8BLX7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col16a1Q8BLX7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col16a1Q8BLX7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col16a1Q8BLX7 AC139382.1-201ENSMUST00000221402 498 ntBASIC21.2■□□□□ 0.98
Col16a1Q8BLX7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Col16a1Q8BLX7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col16a1Q8BLX7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col16a1Q8BLX7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col16a1Q8BLX7 Gm43702-201ENSMUST00000198772 2546 ntBASIC21.2■□□□□ 0.98
Col16a1Q8BLX7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Col16a1Q8BLX7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col16a1Q8BLX7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col16a1Q8BLX7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 Gm17271-201ENSMUST00000165535 355 ntBASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 Gm5186-201ENSMUST00000218781 920 ntBASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Col16a1Q8BLX7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Col16a1Q8BLX7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col16a1Q8BLX7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col16a1Q8BLX7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col16a1Q8BLX7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col16a1Q8BLX7 Gm11185-201ENSMUST00000117732 1007 ntBASIC21.18■□□□□ 0.98
Col16a1Q8BLX7 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col16a1Q8BLX7 Mir1895-201ENSMUST00000122615 79 ntBASIC21.18■□□□□ 0.98
Col16a1Q8BLX7 Gm6257-201ENSMUST00000163864 910 ntBASIC21.18■□□□□ 0.98
Col16a1Q8BLX7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Col16a1Q8BLX7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC21.18■□□□□ 0.98
Col16a1Q8BLX7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col16a1Q8BLX7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col16a1Q8BLX7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col16a1Q8BLX7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col16a1Q8BLX7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col16a1Q8BLX7 Gm6598-201ENSMUST00000202719 2615 ntBASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 Gm9682-201ENSMUST00000197505 556 ntBASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 AC155252.2-201ENSMUST00000226946 680 ntBASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col16a1Q8BLX7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col16a1Q8BLX7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col16a1Q8BLX7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC21.16■□□□□ 0.98
Col16a1Q8BLX7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col16a1Q8BLX7 AC158538.2-201ENSMUST00000225455 906 ntBASIC21.16■□□□□ 0.98
Col16a1Q8BLX7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col16a1Q8BLX7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col16a1Q8BLX7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col16a1Q8BLX7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms