Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.44■□□□□ 0.38
Nop53Q8BK35 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.44■□□□□ 0.38
Nop53Q8BK35 Gm11539-201ENSMUST00000119837 557 ntBASIC17.44■□□□□ 0.38
Nop53Q8BK35 Gm13436-201ENSMUST00000120418 567 ntBASIC17.44■□□□□ 0.38
Nop53Q8BK35 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.44■□□□□ 0.38
Nop53Q8BK35 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nop53Q8BK35 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Dancr-204ENSMUST00000132389 2347 ntBASIC17.43■□□□□ 0.38
Nop53Q8BK35 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nop53Q8BK35 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Nop53Q8BK35 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop53Q8BK35 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop53Q8BK35 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nop53Q8BK35 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Nop53Q8BK35 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nop53Q8BK35 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop53Q8BK35 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nop53Q8BK35 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nop53Q8BK35 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop53Q8BK35 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop53Q8BK35 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop53Q8BK35 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop53Q8BK35 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nop53Q8BK35 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop53Q8BK35 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop53Q8BK35 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nop53Q8BK35 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nop53Q8BK35 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop53Q8BK35 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nop53Q8BK35 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Actl10-202ENSMUST00000226583 1501 ntBASIC17.41■□□□□ 0.38
Nop53Q8BK35 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop53Q8BK35 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop53Q8BK35 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop53Q8BK35 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Nop53Q8BK35 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nop53Q8BK35 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop53Q8BK35 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop53Q8BK35 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop53Q8BK35 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Nop53Q8BK35 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.4■□□□□ 0.38
Nop53Q8BK35 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop53Q8BK35 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms